2009
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Arsava, E. M., Rahman, R., Rosand, J., Lu, J., Smith, E. E., Rost, N. S., Singhal, A. B., Lev, M. H., Furie, K. L., Koroshetz, W. J., Sorensen, A. G. and Ay, H. (2009). "Severity of leukoaraiosis correlates with clinical outcome after ischemic stroke." Neurology 72(16): 1403-10. (PubMed Entry)
Astradsson, A., Jenkins, B. G., Choi, J. K., Hallett, P. J., Levesque, M. A., McDowell, J. S., Brownell, A. L., Spealman, R. D. and Isacson, O. (2009). "The blood-brain barrier is intact after levodopa-induced dyskinesias in parkinsonian primates--evidence from in vivo neuroimaging studies." Neurobiol Dis 35(3): 348-351. (PubMed Entry)
Ay, H., Arsava, E.M., Johnston, S.C., Vangel, M., Schwamm, L.H., Furie, K.L., Koroshetz, W.J. and Sorensen, A.G. (2009). "Clinical- and imaging-based prediction of stroke risk after transient ischemic attack: the CIP model." Stroke 40(1): 181-6. (PubMed Entry)
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Becerra, L., Harris, W., Grant, M., George, E., Boas, D. and Borsook, D. (2009). "Diffuse optical tomography activation in the somatosensory cortex: specific activation by painful vs. non-painful thermal stimuli." PLoS One 4(11): e8016. (PubMed Entry)
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Bell, A.H., Hadj-Bouziane, F., Frihauf, J.B., Tootell, R.B. and Ungerleider, L.G. (2009). "Object representations in the temporal cortex of monkeys and humans as revealed by functional magnetic resonance imaging." J Neurophysiol 101(2): 688-700. (PubMed Entry)
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Breslin, J.G. and Clark, T. SWAN/SIOC: Alignment Between the SWAN and SIOC Ontologies. Passant A and Ciccarese P (eds.) W3C Interest Group Note, 20 October 2009. World Wide Web Consortium. http://www.w3.org/TR/hcls-swansioc/
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Chen, Y., Aguirre, A.D., Ruvinskaya, L., Devor, A., Boas, D.A. and Fujimoto, J.G. (2009). "Optical coherence tomography (OCT) reveals depth-resolved dynamics during functional brain activation." J Neurosci Methods 178(1): 162-73. (PubMed Entry)
Clark, T., Luciano, J., Marshall, M.S., Prud’hommeaux, E. and Stephens, S. (eds.) Proceedings of the Workshop on Semantic Web Applications in Scientific Discourse (SWASD 2009), collocated with the 8th International Semantic Web Conference (ISWC-2009), Washington DC, USA, October 26, 2009. (accepted) CEUR Workshop Proceedings 23. CEUR, Aachen, Germany. http://ceur-ws.org.
Clark, T. and Ocana, M. Semantic Web Applications in Neuromedicine (SWAN) Ontology. Passant A and Ciccarese P (eds.) W3C Interest Group Note, 20 October 2009. World Wide Web Consortium. http://www.w3.org/TR/hcls-swan/
Cho, H., Ryu, S., Ackerman, J.L. and Song, Y.Q. (2009). "Visualization of inhomogeneous local magnetic field gradient due to susceptibility contrast." J Magn Reson 198(1): 88-93. (PubMed Entry)
Choi, J. K., Kustermann, E., Dedeoglu, A. and Jenkins, B. G. (2009). "Magnetic resonance spectroscopy of regional brain metabolite markers in FALS mice and the effects of dietary creatine supplementation." Eur J Neurosci 30(11): 2143-2150. (PubMed Entry)
Cohen, D. and Halgren, E. (2009). Magnetoencephalography. Encyclopedia of Neuroscience. L. R. Squire. Oxford, Academic Press. 5: 615-622.
Corlosquet, S., Delbru, R. , Clark, T., Polleres, A. and Decker, S. (2009) Produce and Consume Linked Data with Drupal, in The Semantic Web: ISWC 2009: 8^th International Semantic Web Conference, ISWC 2009, Chantilly VA, October 25-29, 2009, Proceedings (Lecture Notes in Computer Science 5823).
Das, S., Goetz, M., Girard, L. and Clark, T. Scientific Publications on Web 3.0. 13th International Conference on Electronic Publishing (ELPUB 2009), 10-12 June 2009, Milan, Italy.
Deng, W., Yang, C., Alagappan, V., Wald, L.L., Boada, F.E. and Stenger, V.A. (2009). "Simultaneous z-shim method for reducing susceptibility artifacts with multiple transmitters." Magn Reson Med 61(2): 255-9. (PubMed Entry)
Desikan, R. S., Cabral, H. J., Hess, C. P., Dillon, W. P., Glastonbury, C. M., Weiner, M. W., Schmansky, N. J., Greve, D. N., Salat, D. H., Buckner, R. L. and Fischl, B. (2009). "Automated MRI measures identify individuals with mild cognitive impairment and Alzheimer's disease." Brain 132(Pt 8): 2048-2057. (PubMed Entry)
Diamond, S. G., Perdue, K. L. and Boas, D. A. (2009). "A cerebrovascular response model for functional neuroimaging including dynamic cerebral autoregulation." Math Biosci 220(2): 102-117. (PubMed Entry)
Dickerson, B.C., Bakkour, A., Salat, D.H., Feczko, E., Pacheco, J., Greve, D.N., Grodstein, F., Wright, C.I., Blacker, D., Rosas, H.D., Sperling, R.A., Atri, A., Growdon, J.H., Hyman, B.T., Morris, J.C., Fischl, B. and Buckner, R.L. (2009). "The cortical signature of Alzheimer's disease: regionally specific cortical thinning relates to symptom severity in very mild to mild AD dementia and is detectable in asymptomatic amyloid-positive individuals." Cereb Cortex 19(3): 497-510. (PubMed Entry)
Driver, J., Blankenburg, F., Bestmann, S., Vanduffel, W. and Ruff, C. C. (2009). "Concurrent brain-stimulation and neuroimaging for studies of cognition." Trends Cogn Sci 13(7): 319-327. (PubMed Entry)
Ekstrom, L. B., Roelfsema, P. R., Arsenault, J. T., Kolster, H. and Vanduffel, W. (2009). "Modulation of the Contrast Response Function by Electrical Microstimulation of the Macaque Frontal Eye Field." J Neurosci 29(34): 10683–10694. (PubMed Entry)
Evans, K.C., Dougherty, D.D., Schmid, A.M., Scannell, E., McCallister, A., Benson, H., Dusek, J.A. and Lazar, S.W. (2009). "Modulation of spontaneous breathing via limbic/paralimbic-bulbar circuitry: an event-related fMRI study." Neuroimage 47(3): 961-971. (PubMed Entry)
Fang, J., Jin, Z., Wang, Y., Li, K., Kong, J., Nixon, E.E., Zeng, Y., Ren, Y., Tong, H., Wang, Y., Wang, P. and Hui, K.K. (2009). "The salient characteristics of the central effects of acupuncture needling: limbic-paralimbic-neocortical network modulation." Hum Brain Mapp 30(4): 1196-206. (PubMed Entry)
Fang, Q. and Boas, D. A. (2009). "Monte Carlo Simulation of Photon Migration in 3D Turbid Media Accelerated by Graphics Processing Units." Opt Express 17(22): 20178-20190. (PubMed Entry)
Fang, Q., Carp, S.A., Selb, J., Boverman, G., Zhang, Q., Kopans, D.B., Moore, R.H., Miller, E.L., Brooks, D.H. and Boas, D.A. (2009). "Combined optical imaging and mammography of the healthy breast: optical contrast derived from breast structure and compression." IEEE Trans Med Imaging 28(1): 30-42. (PubMed Entry)
Fischl, B., Stevens, A. A., Rajendran, N., Yeo, B. T., Greve, D. N., Van Leemput, K., Polimeni, J. R., Kakunoori, S., Buckner, R. L., Pacheco, J., Salat, D. H., Melcher, J., Frosch, M. P., Hyman, B. T., Grant, P. E., Rosen, B. R., van der Kouwe, A. J., Wiggins, G. C., Wald, L. L. and Augustinack, J. C. (2009). "Predicting the location of entorhinal cortex from MRI." Neuroimage 47(1): 8-17. (PubMed Entry)
Fjell, A. M., Westlye, L. T., Amlien, I., Espeseth, T., Reinvang, I., Raz, N., Agartz, I., Salat, D. H., Greve, D. N., Fischl, B., Dale, A. M. and Walhovd, K. B. (2009). "High consistency of regional cortical thinning in aging across multiple samples." Cereb Cortex 19(9): 2001-2012. (PubMed Entry)
Fjell, A. M., Westlye, L. T., Amlien, I., Espeseth, T., Reinvang, I., Raz, N., Agartz, I., Salat, D. H., Greve, D. N., Fischl, B., Dale, A. M. and Walhovd, K. B. (2009). "Minute effects of sex on the aging brain: a multisample magnetic resonance imaging study of healthy aging and Alzheimer's disease." J Neurosci 29(27): 8774-8783. (PubMed Entry)
Freiwald, W.A., Tsao, D.Y. and Livingstone, M.S. (2009). "A face feature space in the macaque temporal lobe." Nat Neurosci 12(9): 1187-1196. (PubMed Entry)
Ganis, G. and Keenan, J. P. (2009). "The cognitive neuroscience of deception." Soc Neurosci 4(6): 465-472. (PubMed Entry)
Ganis, G. & Kosslyn, S. M. (2009). Detection of deception and brain imaging. In: A. Jamieson & A. Moenssens (Eds.), Encyclopedia of Forensic Science. Wiley.
Ganis, G., Morris, R. R. and Kosslyn, S. M. (2009). "Neural processes underlying self- and other-related lies: an individual difference approach using fMRI." Soc Neurosci 4(6): 539-553. (PubMed Entry)
Ganis, G., Thompson W. L., Kosslyn S. M. (2009). Visual mental imagery: more than just “seeing with the mind’s eye”. In Brockmole J.R. (Ed.), The Visual World in Memory (pp. 215-249). Psychology Press.
Gow, D.W., Jr., Keller, C.J., Eskandar, E., Meng, N. and Cash, S.S. (2009). "Parallel versus serial processing dependencies in the perisylvian speech network: a Granger analysis of intracranial EEG data." Brain Lang 110(1): 43-48. (PubMed Entry)
Gow, D.W., Jr. and Segawa, J.A. (2009). "Articulatory mediation of speech perception: a causal analysis of multi-modal imaging data." Cognition 110(2): 222-36. (PubMed Entry)
Grant, P. E., Roche-Labarbe, N., Surova, A., Themelis, G., Selb, J., Warren, E. K., Krishnamoorthy, K. S., Boas, D. A. and Franceschini, M. A. (2009). "Increased cerebral blood volume and oxygen consumption in neonatal brain injury." J Cereb Blood Flow Metab 29(10): 1704-1713.
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Greene, J. D. and J. M. Paxton (2009). "Patterns of neural activity associated with honest and dishonest moral decisions." Proc Natl Acad Sci U S A 106(30): 12506-12511. (PubMed Entry)
Greve, D. N. and B. Fischl (2009). "Accurate and robust brain image alignment using boundary-based registration." Neuroimage 48(1): 63-72. (PubMed Entry)
Groza, T., Handschuh, S., Clark, T. and Shum, S.B. A Short Survey of Scientific Discourse Representation Models. Workshop on Semantic Web Applications in Scientific Discourse, 8th International Conference on Semantic Web (ISWC 2009), Oct 25-29 2009, Chantilly VA, CEUR Workshop Proceedings.
Gutchess, A. H. and Indeck, A. (2009). "Cultural influences on memory." Prog Brain Res 178: 137-150. (PubMed Entry)
Hadjikhani, N., Joseph, R.M., Manoach, D.S., Naik, P., Snyder, J., Dominick, K., Hoge, R., Van den Stock, J., Tager Flusberg, H. and de Gelder, B. (2009). "Body expressions of emotion do not trigger fear contagion in autism spectrum disorder." Soc Cogn Affect Neurosci 4(1): 70-78. (PubMed Entry)
Hadjikhani, N., Kveraga, K., Naik, P. and Ahlfors, S.P. (2009). "Early (M170) activation of face-specific cortex by face-like objects." Neuroreport 20(4): 403-7. (PubMed Entry)
Hedden, T., Van Dijk, K. R., Becker, J. A., Mehta, A., Sperling, R. A., Johnson, K. A. and Buckner, R. L. (2009). "Disruption of functional connectivity in clinically normal older adults harboring amyloid burden." J Neurosci 29(40): 12686-12694. (PubMed Entry)
Hui, K. K., O. Marina, et al. (2009). "Acupuncture mobilizes the brain's default mode and its anti-correlated network in healthy subjects." Brain Res 1287: 84-103. (PubMed Entry)
Huppert, T.J., Allen, M.S., Diamond, S.G. and Boas, D.A. (2009). "Estimating cerebral oxygen metabolism from fMRI with a dynamic multicompartment Windkessel model." Hum Brain Mapp 30(5): 1548-67. (PubMed Entry)
Huppert, T.J., Diamond, S.G., Franceschini, M.A. and Boas, D.A. (2009). "HomER: a review of time-series analysis methods for near-infrared spectroscopy of the brain." Appl Opt 48(10): D280-98. (PubMed Entry)
Huppert, T. J., Jones, P. B., Devor, A., Dunn, A. K., Teng, I. C., Dale, A. M. and Boas, D. A. (2009). "Sensitivity of neural-hemodynamic coupling to alterations in cerebral blood flow during hypercapnia." J Biomed Opt 14(4): 044038. (PubMed Entry)
Joly, O., Vanduffel, W. and Orban, G. A. (2009). "The monkey ventral premotor cortex processes 3D shape from disparity." Neuroimage 47(1): 262-272. (PubMed Entry)
Jones, S. R., Pritchett, D. L., Sikora, M. A., Stufflebeam, S. M., Hamalainen, M. and Moore, C. I. (2009). "Quantitative analysis and biophysically realistic neural modeling of the MEG mu rhythm: rhythmogenesis and modulation of sensory-evoked responses." J Neurophysiol 102(6): 3554-3572. (PubMed Entry)
Jovicich, J., Czanner, S., Han, X., Salat, D., van der Kouwe, A., Quinn, B., Pacheco, J., Albert, M., Killiany, R., Blacker, D., Maguire, P., Rosas, D., Makris, N., Gollub, R., Dale, A., Dickerson, B. C. and Fischl, B. (2009). "MRI-derived measurements of human subcortical, ventricular and intracranial brain volumes: Reliability effects of scan sessions, acquisition sequences, data analyses, scanner upgrade, scanner vendors and field strengths." Neuroimage 46(1): 177-192. (PubMed Entry)
Keller, C.J., Cash, S.S., Narayanan, S., Wang, C., Kuzniecky, R., Carlson, C., Devinsky, O., Thesen, T., Doyle, W., Sassaroli, A., Boas, D.A., Ulbert, I. and Halgren, E. (2009). "Intracranial microprobe for evaluating neuro-hemodynamic coupling in unanesthetized human neocortex." J Neurosci Methods 179: 208-218. (PubMed Entry)
Kelly, K. J., Murray, E., Barrios, V., Gorman, J., Ganis, G. and Keenan, J. P. (2009). "The effect of deception on motor cortex excitability." Soc Neurosci 4(6): 570-574. (PubMed Entry)
Kensinger, E. A. (2009). "What factors need to be considered to understand emotional memories?" Emot Rev 1: 116-118.
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Knake, S., Salat, D. H., Halgren, E., Halko, M. A., Greve, D. N. and Grant, P. E. (2009). "Changes in white matter microstructure in patients with TLE and hippocampal sclerosis." Epileptic Disord 11(3): 244-250. (PubMed Entry)
Kolster, H., Mandeville, J. B., Arsenault, J. T., Ekstrom, L. B., Wald, L. L. and Vanduffel, W. (2009). "Visual field map clusters in macaque extrastriate visual cortex." J Neurosci 29(21): 7031-7039. (PubMed Entry)
Kong, J., Kaptchuk, T.J., Polich, G., Kirsch, I., Vangel, M., Zyloney, C., Rosen, B. and Gollub, R. (2009). "Expectancy and treatment interactions: a dissociation between acupuncture analgesia and expectancy evoked placebo analgesia." Neuroimage 45(3): 940-949. (PubMed Entry)
Kong, J., Kaptchuk, T.J., Polich, G., Kirsch, I., Vangel, M., Zyloney, C., Rosen, B. and Gollub, R.L. (2009). "An fMRI study on the interaction and dissociation between expectation of pain relief and acupuncture treatment." Neuroimage 47(3): 1066-1076. (PubMed Entry)
Kong, J., Kaptchuk, T.J., Webb, J.M., Kong, J.T., Sasaki, Y., Polich, G.R., Vangel, M.G., Kwong, K., Rosen, B. and Gollub, R.L. (2009). "Functional neuroanatomical investigation of vision-related acupuncture point specificity--a multisession fMRI study." Hum Brain Mapp 30(1): 38-46. (PubMed Entry)
Kosslyn, S.M., Thompson, W. L., & Ganis, G. (2009). Why the imagery debate won’t go away? In Gazzaniga, M.S. (Ed.), The Cognitive Neurosciences IV (pp. 1241-1246). MIT Press.
Kumar, A. T., Chung, E., Raymond, S. B., van de Water, J. A., Shah, K., Fukumura, D., Jain, R. K., Bacskai, B. J. and Boas, D. A. (2009). "Feasibility of in vivo imaging of fluorescent proteins using lifetime contrast." Opt Lett 34(13): 2066-8. (PubMed Entry)
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Medarova, Z., Rashkovetsky, L., Pantazopoulos, P. and Moore, A. (2009). "Multiparametric monitoring of tumor response to chemotherapy by noninvasive imaging." Cancer Res 69(3): 1182-1189. (PubMed Entry)
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